IDENTIFIKASI AKTINOMISETES SEDIMEN AIR TAWAR MAMASA, SULAWESI BARAT DAN AKTIVITASNYA SEBAGAI ANTIBAKTERI DAN PELARUT FOSFAT

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Ade Lia Putri
Puspita Lisdiyanti
Mia Kusmiati

Abstract

Sebagian besar aktinomisetes yang telah diisolasi dan dilakukan penapisan metabolit sekundernya berasal dari sampel tanah dan laut. Konsekuensinya, kesempatan untuk menemukan aktinomisetes jenis baru maupun yang menghasilkan metabolit sekunder baru dari tanah dan laut semakin berkurang. Eksplorasi aktinomisetes dari lingkungan lain seperti sedimen air tawar jarang dilakukan. Pada penelitian ini, 30 isolat aktinomisetes yang diisolasi dari sedimen air tawar di Kabupaten Mamasa, Sulawesi Barat, telah diidentifikasi dan dilakukan penapisan antibakteri dan kemampuan isolat dalam melarutkan fosfat. Aktinomisetes diisolasi dengan metode pengenceran secara langsung dan selanjutnya diidentifikasi secara morfologi dan molekular berdasarkan gen 16S rRNA. Metode yang digunakan dalam penapisan aktivitas antibakteri adalah agar plug diffusion method, sedangkan kemampuan aktinomisetes dalam melarutkan fosfat diuji dengan cara menumbuhkan isolat pada media PKA. Isolat yang paling banyak diisolasi termasuk ke dalam marga Streptomyces (80%). Dari 30 isolat, 56,6% isolat menunjukkan adanya aktivitas antibakteri dan 36,6% dari isolat berpotensi sebagai pelarut fosfat, yang termasuk ke dalam marga Streptomyces, Actinomadura, dan Kitasatospora.

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How to Cite
Ade Lia Putri, Puspita Lisdiyanti, & Mia Kusmiati. (2018). IDENTIFIKASI AKTINOMISETES SEDIMEN AIR TAWAR MAMASA, SULAWESI BARAT DAN AKTIVITASNYA SEBAGAI ANTIBAKTERI DAN PELARUT FOSFAT. Jurnal Bioteknologi Dan Biosains Indonesia, 5(2), 139–148. https://doi.org/10.29122/jbbi.v5i2.2953
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References

Antonio T, Bellão C, Corrêa T, Cavallieri AP, Badino AC, Araujo MLGC (2012) Evaluation of different media for the production of cephalosporins by Streptomyces clavuligerus ATCC 27064. Braz Arch Biol Technol 55:819-825. doi: 10.1590/S1516-89132012000600003

Balouiri M, Sadiki M, Ibnsouda SK (2016) Methods for in vitro evaluating antimicrobial activity: A review. J Pharm Anal 6:71-79. doi: 10.1016/j.jpha.2015.11.005

Bull AT, Ward AC, Goodfellow M (2000) Search and discovery strategies for biotechnology: the paradigm shift. Microbiol Mol Biol Rev 64:573-606

Chater KF, Chandra G (2006) The evolution of development in Streptomyces analysed by genome comparisons. FEMS Microbiol Rev 30:651-672. doi: 10.1111/j.1574-6976.2006.00033.x

Chaudhary HS, Soni B, Shrivastava AR, Shrivastava S (2013) Diversity and versatility of actinomycetes and its role in antibiotic production. J Appl Pharm Sci 3:S83-S94. doi: 10.7324/JAPS.2013.38.S14

Chavan DV, Mulaje SS, Mohalkar RY (2013) A review on actinomycetes and their biotechnological application. Int J Pharmaceut Sci Res 4:1730-1742. doi: 10.13040/IJPSR.0975-8232.4(5).1730-42

Chi WJ, Lee SY, Lee J (2011) Functional analysis of SGR4635-induced enhancement of pigmented antibiotic production in Streptomyces lividans. J Microbiol 49:828-833. doi: 10.1007/s12275-011-1100-7

Das S, Lyla PS, Khan SA (2008). Distribution and generic composition of culturable marine actinomycetes from the sediments of Indian continental slope of Bay of Bengal. Chin J Oceanol Limnol 26:166-177. doi: 10.1007/s00343-008-0166-5

de Lima Procópio RE, da Silva IR, Martins MK, Azevedo JL, Araújo JM (2012) Antibiotics produced by Streptomyces. Braz J Infect Dis 16:466-471. doi: 10.1016/j.bjid.2012.08.014

Franco-Correa M, Quintana A, Duque C, Suarez C, Rodríguez MX, Barea JM (2010) Evaluation of actinomycete strains for key traits related with plant growth promotion and mycorrhiza helping activities. Appl Soil Ecol 45:209-217. doi: 10.1016/j.apsoil.2010.04.007

Gao W, Wu Z, Sun J, Ni X, Xia H (2017) Modulation of kanamycin B and kanamycin A biosynthesis in Streptomyces kanamyceticus via metabolic engineering. PLoS One. 12(7):e0181971. doi: 10.1371/journal.pone.0181971

Ghorbani-Nasrabadi R, Greiner R, Alikhani HA, Hamedi J, Yakhchali B (2013) Distribution of actinomycetes in different soil ecosystems and effect of media composition on extracellular phosphatase activity. J Soil Sci Plant Nutr 13:223-236. doi: 10.4067/S0718-95162013005000020

Halder AK, Chakrabartty PK (1993) Solubilization of inorganic phosphate by Rhizobium. Folia Microbiol 38:325-330. doi: 10.1007/BF02898602

Han NY, Yi TJ, Chia YT (2013) Antimicrobial activity of actinomycetes isolated from Paya Maga, Sarawak. Jurnal Teknologi (Sciences and Engineering) 62:17-19. doi: 10.11113/jt.v62.1872

Jadon R, Singh V, Chaudhary HS (2014) Update on bioactive molecules of actinomycetes. Biosciences Biotechnology Research Asia 11:705-714. doi: 10.13005/bbra/1325

Jog R, Pandya M, Nareshkumar G, Rajkumar S (2014) Mechanism of phosphate solubilization and antifungal activity of Streptomyces spp. isolated from wheat roots and rhizosphere and their application in improving plant growth. Microbiology 160:778–788. doi: 10.1099/ mic.0.074146-0

Katagi T (2013) Aerobic microbial transformation of pesticides in surface water. J Pestic Sci 38:10-26. doi: 10.1584/jpestics.D12-053

Kim OS, Cho YJ, Lee K, Yoon SH, Kim M, Na H, Park SC, Jeon YS, Lee JH, Yi H, Won S, Chun J (2012) Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int J Syst Evol Microbiol 62:716-721. doi: 10.1099/ijs.0.038075-0

Lee HJ, Whang KS (2016) Streptomyces rhizosphaerihabitans sp. nov. and Streptomyces adustus sp. nov., isolated from bamboo forest soil. Int J Syst Evol Microbiol 66:3573-3578. doi: 10.1099/ijsem.0.001236

Li Q, Chen X, Jiang Y, Jiang C (2016) Morphological identification of Actinobacteria. Chapter 3. In Dhanasekaran D and Jiang Y (Ed). Actinobacteria: Basics and Biotechnological Applications. IntechOpen, London. doi: 10.5772/61461

Meanwell RJL, Shama G (2008) Production of streptomycin from chitin using Streptomyces griseus in bioreactors of different configuration. Bioresource Technology 99:5634-5639. doi: 10.1016/j.biortech.2007.10.036

Mohseni M, Norouzi H, Hamedi J, Roohi A (2013) Screening of antibacterial producing actinomycetes from sediments of the Caspian Sea. Int J Mol Cell Med 2:64-71

Otoguro M, Ratnakomala S, Lestari Y, Hastuti RD, Triana E, Widyastuti Y, Ando K (2009) Streptomyces baliensis sp. nov., isolated from Balinese soil. Int J Syst Evol Microbiol 59:2158-2161. doi: 10.1099/ijs.0.007179-0

Paul D, Sinha SN (2013a) Isolation of phosphate solubilizing bacteria and total heterotrophic bacteria from river water and study of phosphatase activity of phosphate solubilizing bacteria. Adv Appl Sci Res 4:409-412

Paul D, Sinha SN (2013b) Phosphate solubilization potential and phosphatase activity of some bacterial strains isolated from thermal power plant effluent exposed water of river Ganga. CIBTech J Microbiol 2:1-7

Paul D, Sinha SN (2017) Isolation and characterization of phosphate solubilizing bacterium Pseudomonas aeruginosa KUPSB12 with antibacterial potential from river Ganga, India. Annals of Agrarian Science 15:130-136. doi: 10.1016/ j.aasci.2016.10.001

Prakash D, Nawani N, Prakash M, Bodas M, Mandal A, Khetmalas M, Kapadnis B (2013) Actinomycetes: A repertory of green catalysts with a potential revenue resource. BioMed Res Int 1-8. doi: 10.1155/2013/264020

Raja A, Prabakarana P (2011) Actinomycetes and drug – An overview. Am J Drug Discov Develop 1:75-84. doi: 10.3923/ajdd.2011.75.84

Rajput MS, Naresh KG, Rajkumar S (2013) Repression of oxalic acid-mediated mineral phosphate solubilization in rhizospheric isolates of Klebsiella pneumoniae by succinate. Arch Microbiol 195:81–88. doi: 10.1007/s00203-012-0850-x

Ram L (2014) Optimization of medium for the production of Streptomycin by Streptomyces griseus. Int J Pharmaceut Sci Invention 3:1-8

Sahu MK, Sivakumar K, Thangaradjou T, Kannan L (2007) Phosphate solubilizing actinomycetes in the estuarine environment: An inventory. J Environ Biol 28:795-798

Sharma D, Kaur T, Chadha BS, Manhas RK (2011) Antimicrobial activity of actinomycetes against multidrug resistant Staphylococcus aureus, E. coli and various other pathogens. Trop J Pharm Res 10:801-808. Doi: 10.4314/tjpr.v10i6.14

Singh V, Haque S, Singh H, Verma J, Vibha K, Singh R, Jawed A, Tripathi CKM (2016) Isolation, screening, and identification of novel isolates of actinomycetes from India for antimicrobial applications. Front Microbiol 7:1921. doi: 10.3389/fmicb.2016.01921

Spanogiannopoulos P, Thaker M, Koteva K, Waglechner N, Wright GD (2012) Characterization of a rifampin-inactivating glycosyltransferase from a screen of environmental actinomycetes. Antimicrob Agents Chemother 56:5061-5069. doi: 10.1128/AAC.01166-12

Sripreechasak P, Matsumoto A, Suwanborirux K, Inahashi Y, Shiomi K, Tanasupawat S, Takahashi Y (2013) Streptomyces siamensis sp. nov., and Streptomyces similanensis sp. nov., isolated from Thai soils. J antibiot 66:633-640. doi: 10.1038/ja.2013.60

Sripreechasak P, Phongsopitanun W, Tamura T, Tanasupawat S (2017) Streptomyces krungchingensis sp. nov., isolated from soil. Int J Syst Evol Microbiol 67:50-54. doi: 10.1099/ijsem.0.001570

Subramani R, Aalbersberg W (2012) Marine actinomycetes: An ongoing source of novel bioactive metabolites. Microbiol Res 167:571-580. doi: 10.1016/j.micres.2012.06.005

Tamaki H, Sekiguchi Y, Hanada S, Nakamura K, Nomura N, Matsumura M, Kamagata Y (2005) Comparative analysis of bacterial diversity in freshwater sediment of a shallow eutrophic lake by molecular and improved cultivation-based techniques. Appl Environ Microbiol 71:2162-2169. doi: 10.1128/ AEM.71.4.2162-2169.2005

Torres-Bacete J, Hormigo D, Torres-Gúzman R, Arroyo M, Castillón MP, García L, Acebal C, de la Mata I (2015) Overexpression of penicillin V acylase from Streptomyces lavendulae and elucidation of Its catalytic residues. Appl Environ Microbiol 81:1225-1233. doi: 10.1128/AEM.02352-14

Widenfalk A (2005) Interactions between pesticides and microorganisms in freshwater sediments – Toxic effect and implications for bioavailability. Thesis, Swedish University of Agricultural Sciences

Yamamura H, Hayakawa M, Nakagawa Y, Iimura Y (2003) Species diversity of Nocardiae isolated from lake and moat sediment samples. Actinomycetologica 17:44-46. doi: 10.3209/saj.17_44