MOLECULAR IDENTIFICATION OF PHOSPHATE SOLUBILIZING BACTERIA FROM PGPR PRODUCT DERIVED FROM TEMANGGUNG REGENCY

Main Article Content

Muhammad Falih Akbar
Susiana Purwantisari
Sri Pujiyanto
Rejeki Siti Ferniah

Abstract

T Phosphate solubilizing bacteria are soil bacteria that can dissolve phosphates from insoluble phosphate bonds so that they can be absorbed by plants. Phosphates in the soil are naturally present in organic and inorganic forms. Both forms are insoluble or slightly soluble forms of phosphate, so their availability for soil biota is very limited. This study aimed to identify the phosphate solubilizing bacteria from locally PGPR product from Temanggung, Indonesia, namely BPF 1. The method in this study was carried out by molecular identification using the 16S rRNA encoding gene which includes bacterial DNA isolation, DNA amplification using PCR, bacterial DNA sequencing and the creation of phylogenetic trees. The results of the study were obtained isolate bacteria solubilizing phosphate BPF 1 from PGPR products of local farmers of Temanggung Regency identified as the genus Bacillus, having the closest kinship with B. subtilis strain SBMP4 (NR_118383.1) with a similarity of 98.42%.

Article Details

How to Cite
Akbar, M. F., Purwantisari, S., Pujiyanto, S., & Ferniah, R. S. (2023). MOLECULAR IDENTIFICATION OF PHOSPHATE SOLUBILIZING BACTERIA FROM PGPR PRODUCT DERIVED FROM TEMANGGUNG REGENCY. Jurnal Bioteknologi Dan Biosains Indonesia, 10(2), 150–157. Retrieved from https://ejournal.brin.go.id/JBBI/article/view/2840
Section
Articles

References

Akihary C. V., & Kolondam B. J. (2020). Uti-lisation of 16S rRNA Gene as a Bac-terial Identification Tool for Indonesian Studies. Pharmacon, 9(1), 16. doi:10.35799/pha.9.2020.27405

Ali S., Hameed S., Imran A., Iqbal M., and Lazarovits G. (2014). Genetic, Physio-logical and Biochemical Characteriza-tion of Bacillus sp. Strain RMB7 Ex-hibiting Plant Growth Promoting and Broad Spectrum Antifungal Activities. Microbial Cell Factories, 13(1), 1–15. doi:10.1186/s12934-014-0144-x

Anastia N., and Lubis S. S. (2022). Potential of Phosphate Solubilizing Bacteria from Mangrove Rhizosphere on Maize Plant Growth (Zea mays).

Cahyani N. C., Nuraini Y., and Pratomo A. G. (2018). Potential Utilisation of Plant Growth Promoting Rhizobacteria (PGPR) and Various Planting Media on Soil Microbial Populations and Po-tato Growth and Production. Jurnal Tanah Dan Sumberdaya Lahan, 5(2), 2549–9793. http://jtsl.ub.ac.id

Ekblom R., and Wolf J. B. W. (2014). A Field Guide to Whole-Genome Se-quencing, Assembly and Annotation. Evolutionary Applications, 7(9), 1026–1042. doi:10.1111/eva.12178

Fatchiyah A., Widyarti L., and Rahayu S. (2011). Molecular Biology Basic Prin-ciples of Analysis. Erlangga.

Geetha K., Rajithasri A. B., and Bhadraiah B. (2014). Isolation of Plant growth promoting rhizo bacteria from rizo-sphere soils of green gram, biochemi-cal characterization and screening for antifungal activity against pathogenic fungi. International Journal of Phar-maceutical Science Invention, 3(9), 47–54.

Iqbal M., Dwi Buwono I., and Kurniawati N. (2016). Comparative Analysis of DNA Isolation Methods for Detection of White Spot Syndrome Virus (WSSV) in Vaname Shrimp (Litopenaeus van-namei). Jurnal Perikanan Kelautan, VII(1), 54–65.

Johnson, J.S., Spakowicz, D.J., Hong, BY. et al. Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis. Nat Commun 10, 5029 (2019). https://doi.org/10.1038/s41467-019-13036-1

Lin S., Litaker RW., and Sunda WG. (2016). Phosphorus Physiological Ecology and Molecular Mechanisms in Marine Phytoplankton. J. Phycol., 52(1), 10–36. doi:10.1111/jpy.12365

Lokapirnasari W., Sahidu A., Nurhajati T., Supranianondo S., and Yulianto A. (2017). 16S DNA Sequencing of

Cellulolytic Bacteria from Rumen Fluid Waste of Ongole Cattle. Jurnal Veter-iner, 18(1), 76–82. doi:10.19087/jveteriner.2017.18.1.76

Mandic-Mulec I, Stefanic P, van Elsas JD. 2015. Ecology of Bacillaceae. Micro-biol Spectrum 3(2):TBS-0017-2013. doi:10.1128 /microbiolspec.TBS-0017-2013.

Murtiyaningsih H. (2017). DNA Genomic Isolation and Genetic Kinship Identifi-cation of Pineapple Using RAPD (Random Amplified Polimorfic DNA). Agritrop, 15(1), 84–93.

Musaad I. (2018). Potential and Technology of Utilising Natural Phosphate as Phosphate-Plus Fertilizer . Brainy Bee.

Naveena M. L., and Gowrie S. U. (2018). Identification of Plant Growth promot-ing Rhizobacteria (PGPR) from Re-vegetated Soils of Lignite Mines of Neyveli, Tamilnadu. International Journal of Pharma and Bio Sciences, 9(1). doi:10.22376/ijpbs.2018.9.1.b122-129

Nisa’ N. A. (2018). Isolation and Identifica-tion of Phosphate Solubilizing Bacte-ria with 16S rRNA Sequences from Organic Farming Soil of Sumberejo Village, Batu.

Noer S. (2021). Molecular Identification of Bacteria Using 16S rRNA. EduBiolo-gia: Biological Science and Education Journal, 1(1), 1–6. doi:10.30998/edubiologia.v1i1.8596

Oksana, O., Irfan, M., Fianiray, A. R., and Zam, S. I. (2020). Isolation and Identi-fication of phosphate Solubilizing Bac-teria in Ultisols in Rumbai District, Pekanbaru. Agrotechnology Research Journal, 4(1), 22–25. https://doi.org/10.20961/agrotechresj.v4i1.36063

Rosahdi T. D., Tafiani N., and Hafsari A. R. (2019). Species Identification of K2Br5 Bacterial Isolates from Karst Soil by Kinship System Through 16S rRNA Gene Nucleotide Sequence Analysis. Al-Kimiya, 5(2), 84–88. doi:10.15575/ak.v5i2.3836

Setiani U. (2016). Application of Phosphate Solubilizing Bacteria Isolate K2.BR.7 to the Germination of Red Chilli Plants (Capsicum Annuum L.).

Sharma S. B., Sayyed R. Z., Trivedi M. H., and Gobi T. A. (2013). Phosphate Solubilizing Microbes: Sustainable Approach for Managing Phosphorus Deficiency in Agricultural Soils. Springer Plus, 2(587), 3305–3307. doi:10.1128/jcm.35.12.3305-3307.1997

Sharon J. A., Hathwaik L. T., Glenn G. M., Imam S. H., and Lee C. C. (2016). Isolation of Efficient Phosphate Solu-bilizing Bacteria Capable of Enhanc-ing Tomato Plant Growth. Journal of Soil Science and Plant Nutrition, 16(2), 525–536. doi:10.4067/S0718-95162016005000043

Ulfiyati N., and Zulaika E. (2015). Phos-phate Solubilizing Bacillus Isolates from Kalimas Surabaya. Jurnal Sains Dan Seni ITS, 4(2), 6–8.

Yu H., Wu X., Zhang G., Zhou F., Harvey P. R., Wang L., Fan S., Xie X., Li F., Zhou H., Zhao X., & Zhang X. (2022). Identification of the Phosphorus-Solubilizing Bacteria Strain JP233 and Its Effects on Soil Phosphorus Leaching Loss and Crop Growth. Frontiers in Microbiology, 13(April), 1–12. doi:10.3389/fmicb.2022.892533

Yulistiana E., Widowati H., and Sutanto A. (2020). Plant Growth Promoting Rhi-zobacteria (PGPR) from Bamboo Apus (Gigantochola apus) Roots Improve Plant Growth. Biolova, 1(1), 1–6. doi:10.24127/biolova.v1i1.23